Neutrokine-α litigation – On a different record from that before the EPO Appeal Board, the UK Court of Appeal finds different facts with a different result

From Paul Cole of Lucas & Cole

On February 9th the Court of Appeal ([2010] EWCA Civ 33; Jacob L.J.) held that Human Genome Sciences Patent EP-B-093

9804 for Neutrokine-α did not meet the industrial applicability requirement of a.52(1) EPC and should be revoked for the United Kingdom. In reaching its decision the Court affirmed a first instance finding of Kitchen J. ([2008] EWHC 1903) but differed from a 2009 finding of the EPO Appeal Board (Neutrokine/HUMAN GENOME SCIENCES Case T 0018/09) that the patent was valid. Since the proceedings relate to the national phase of the granted European patent, protection in other EPC contracting states is unaffected by the decision.

The patent in issue reported the discovery of the new protein and stated that it might be relevant to the treatment of a wide range of diseases ranging from solid tumours to schistosomiasis and other parasitic diseases. No experimental evidence was included in the specification to support these claims which were described at first instance by Kitchen J as “extravagant and sometimes contradictory”. Kitchen J. commented:

“I accept Professor Saklatvala’s evidence that the idea that Neutrokine-α and antagonists to Neutrokine-α could be used to treat the extraordinary range of diseases identified was fanciful. He found it hard to believe that anyone could seriously suggest on the basis of no experimental data at all that that Neutrokine-α was the answer to so many conditions, from treating cancer to treating worms. In my judgment the skilled person would come to the conclusion that the inventors had no idea as to the activity of Neutrokine-α when drafting the Patent.”

In affirming the first instance decision, the court held that there was no difference as regards legal principles between the decision of Kitchin J. and the main decisions of the EPO Appeal Boards regarding DNA sequences and bioinformatics, including Max-Planck T 0870/04 (May 2005), Johns Hopkins T 1329/04 (June 2005), Genentech T 0604/04 (March 2006), ZymoGenetics T 0898/05 (July 2006), Bayer T 1452/06 (May 2007) and Schering T 1165/06 (July 2007). It was now settled that the research tool justification for patenting a new nucleotide sequence or polypeptide was not enough to satisfy the EPC. The following passage from the Max Plank decision showed the dangers if patenting too far upstream were allowed:

“[21] In the board’s judgment, although the present application describes a product (a polypeptide), means and methods for making it, and its prospective use thereof for basic science activities, it identifies no practical way of exploiting it in at least one field of industrial activity. In this respect, it is considered that a vague and speculative indication of possible objectives that might or might not be achievable by carrying out further research with the tool as described is not sufficient for fulfilment of the requirement of industrial applicability. The purpose of granting a patent is not to reserve an unexplored field of research for an applicant.”

However, the Court of Appeal emphasized that what was binding was applicable legal principle, and that each case should be judged on its own facts. It was therefore not legitimate to invite the court to decide the case by reference to the facts of other cases.

Kitchin J.’s factual finding that the potential uses were merely speculative was supported inter alia by a statement of the time from real experts with no axe to grind who were not prepared to say that mere membership of the TNF-ligand superfamily was enough to indicate that any member of the family could be “a candidate for a novel treatment protocol” and his decision on the evidence before him could not be faulted. Although Kitchin J. and the Technical Board of Appeal asked the same key question and identified the same “kernel” the real difference was that Kitchin J. found on the facts before him that the “kernel” did not provide any basis for supposing that the invention was susceptible of industrial application whereas on the facts before it the Board thought there was. One difference in the relevant records was a last minute affidavit by a Dr. Kelsoe which was not before the UK court, and which had never been tested by cross-examination. On the evidence before Kitchen J. the Court of Appeal was not prepared to find that a skilled person would read the patent in the way adopted by the Board, and it was not proper to equate “a first step at the onset of research work” with “an immediate and concrete benefit”. The factual findings of Kitchin J. were to be preferred since they had been arrived at following an intensive examination of the evidence. In conclusion:

“The upshot of all this is that Board, working on different evidence and using a different procedure came to a different conclusion on the facts. We are not bound to follow, or even give deference to, the Board’s findings of fact.”

It is not yet known whether a further appeal to the Supreme Court (the successor to the House of Lords) will be attempted. As there is no dispute as to the underlying law, it seems unlikely that any further appeal will be permitted.

Human Genome Sciences will become one of the most important UK authorities on industrial applicability. It is also likely to be widely read for its observations concerning the differences between proceedings in national courts and in EPO oppositions and concerning the limitations on the extent to which EPO Appeal Board findings should be of persuasive authority for national courts of the EPC contracting states.

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USPTO Request for Comments on Enhancement in the Quality of Patents

In the December 9, 2009 issue of the Fed. Reg., the PTO requested public comments on a wide range of patent preparation and prosecution topics, from “Finding the Best Prior Art” to issuing and responding to first office actions and “proper use of interviews.” (Request attached.) The PTO recently extended the response deadline from Feb. 8th until March 8th. Clearly, any currrent prep/pros attorney or agent could write a textbook on the five topics “in which the PTO is particularly interested” and you are encouraged to reply by email. So I spent some time on one of the topics (and tried to lobby for the return of Prosecution Specialists, at least to 1600). My comments are below. I hope you will take time to send in your thoughts. After all, they don’t ask that often.
___________________________

Dear USPTO:

Following are my comments on Section V(5) -Proper Use of Interviews.

Examiners should be willing to, and encouraged, to grant interviews prior to a first action on the merits as well as after final rejection. Examiners should get credit for more than one interview per application.

Examiners should be responsive to requests that their Supervisor participate, and should be clear about whether or not such participation is required. Examiners should offer to reschedule interviews when a Supervisor unexpectedly cannot participate, with an appropriate amount of lead time.

Examiners or attorneys should be encouraged to propose amended, or even new, claims orally or in writing prior to the interview. If not presented at the interview itself, such claims would not become part of the record.

A more general suggestion: The USPTO should re-establish the position(s) of Prosecution Specialist(s) in the Pharma/Biotech art units (eg, 1600). These positons were once held by Richard Schwartz, Brian Stanton and Margaret Parr. The Specialists acted as ombudsmen for the applicants and attempted to mediate between Examiners and applicants, particularly in cases in which agreement could not be reached on focussed issues and/or the dispute appeared to turn on a particular point of law. The Specialists used to have real authority; they would review actions without identifying the particular application in question (eg,, so that the applicant would not suffer retaliation if the Specialist concluded that applicant’s position was incorrect). If they felt that applicant’s position was correct, they had the power to direct the Examiner to allow some or all of the claims, or at least could prevent the Examiner from filing an Answer if the claims went up on appeal. I worked effectively and regularly with Prosecution Specialists, until Brian Stanton left the Office and the program was, for all practical purposes, ended.

(This is a completely different approach than “second pair of eyes” review of Examiners’ allowances, which applicants took no part in, and which encouraged Examiner’s not to allow applications (for fear they would be found to have erred, and be penalized)).

Respectfully submitted,
Warren D. Woessner

12-09-09 Fed Reg – Request for Comments.pdf

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BIO Joins Stakeholders in Expressing Concerns with Efforts to Restrict Gene Patenting

Today, the Secretary’s Advisory Committee on Genetics Health and Society (SACGHS), approved, with on dissent, a draft report which recommends legislative changes to the patent laws in regards to gene patents and recommends restrictions on licensing of federally funded research. The report will be forwarded with minor changes to the Secretary of Health and Human Services, Kathleen Sebelius. BIO spearheaded a sign-on letter urging the Secretary to reject the SACGHS’ recommendations and released the letter at an event at the National Press Club in Washington DC yesterday. Participating in the event yesterday were Jim Greenwood, President and CEO, BIO, former Senator Birch Bayh, Co-Author of the Bayh-Dole Act, Brian Stanton, Task Force Member, SACGHS, Jim Davis, General Counsel, Human Genome Sciences and Jon Soderstrom, Ph.D., Managing Director of Yale University’s Office of Cooperative Research. See below for links to the letter and a podcast of the event.

Press Release

Stakeholder letter to HHS Secretary

Podcast

BIO Joins Stakeholders in Expressing Concerns with Efforts to Restrict Gene Patenting Restrictions would threaten advances in public health and harm the national economy
For Immediate Release
2/5/2010

WASHINGTON, D.C. (Friday, February 05, 2010) – The Biotechnology Industry Organization (BIO) released today a letter to Health and Human Services Secretary Kathleen Sebelius regarding the potentially harmful recommendations of the Secretary’s Advisory Committee on Genetics, Health and Society (SACGHS) in its Report on Gene Patents and Licensing Practices and Their Impact on Patient Access to Genetic Tests.

BIO was joined on the letter by the Association of University Technology Managers (AUTM), Genetic Alliance, the Wisconsin Alumni Research Foundation (WARF), and more than 20 other stakeholders in urging Secretary Sebelius to reject the Committee’s recommendations and to ensure that the fundamentals of the innovation system put in place nearly 30 years ago through the Bayh-Dole Act are preserved.

In the letter, the stakeholders stated, “We welcome efforts to improve patient access to genetic tests, and stand ready to work with you and other interested parties to do so. But we believe that the recommendations, if implemented, would unravel two sets of laws that are the foundation of life science innovation in this country – the patent system and the Bayh-Dole Act. This would do more harm to patients than good, by impairing the research, development and commercialization of the medicines and diagnostic tests of tomorrow.”

“By undermining the value of gene-based patents, these recommendations would chill future investment and innovation, and would undermine the investment-backed expectations of current patent owners and licensees,” stated BIO President and CEO Jim Greenwood. “The United States must preserve incentives for investment and innovation, particularly given the current state of the economy. It is not the time to undertake or recommend policy changes that would undermine the foundations of American life sciences innovation.”

The letter is available at http://bio.org/ip/genepat/documents/SACGHSsign-onletter2-4-2010final_000.pdf.

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SACGHS Final Report on Gene Patents – Taking a Machete to the IP Thicket

On September 17, 2009, the Secretary of HHS’s Advisory Committee on Genetics, Health and Society (SACGHS) issued a Final Draft Report on Gene Patents and Licensing Practices and Their Impact on Patient Access to Genetic Tests. The 66 page report amounts to a wide-ranging attack on biotechnology patenting and licensing, even as it proclaims that it does not opine on “protein-based genetic tests or patent claims on isolated proteins.” The report also tries to draw a line between its disapproval of patents on isolated genes or on simple tests based on gene-disease associations (read Myriad), and the development of test kits and multiplex tests, which it concedes may require patent protection for commercial development.

While beginning with the self-evident conclusions that professors like to conduct cutting edge research and publish the results (e.g., of gene-disease associations), the Committee goes on to conclude that clinical testing services rapidly arise, if there is physician interest (e.g., if someone will reimburse): “The case studies [of gene-disease associated testing] show that those researchers who did not pursue patenting were willing and able to invest in developing genetic tests soon after their discovery, despite the threat that ‘free riders’ could then offer competing test services.” I bet they are, but they are not offering the test for free – they are charging for it, and trying to use their brand names to gather market share. The Committee found that cost and regulatory hurdles were much higher for companies attempting to develop test kits “than for testing services” and that patent protection “may be needed for companies to be willing to risk resources in satisfying the regulatory requirement.” The Committee also only found that exclusive providers did not price-gouge, provide poor quality control, or otherwise limit patient access (but they might). However, this barely slowed the momentum of the report toward pushing gene and “simple association” patents off a legal cliff.

The next section is an investigation of how gene patents might inhibit “multiplex tests” (e.g., lymphoma-on-a-chip) or whole genome sequencing that could have been written by Affymetrix (a company who is specifically mentioned at least twice). It is beyond the scope of this post to begin to point out the legal errors or omissions in this section which focuses on how allegations of infringement of patents on single genes might block development in this area (something that does not appear to have occurred – I just read a paper on characterizing the genetic basis of malignant breast cancer that used a commercial chip that included over 50,000 gene probes).

Nonetheless, one of the Report’s conclusions is that “claims upon the act of simply associating a genotype with a phenotype should not be patentable because they are claiming laws of nature that cannot be invented around.” The Commission concedes that “[i]t would be up to the courts [to] decide what ‘simply’ means.” That is, enough complexity in a test might render it patentable.

The Report then has a long section on the case law and PTO policy that has ended up with the PTO granting patents on purified and isolated naturally-occurring materials, particularly genes. The Report glosses over the value that patents have provided to society in making hard-to-obtain vitamins and hormones available to patients. The Report goes on to recognize (and approve) that In re Kubin has made it more difficult to patent genes (but manages to skip how In re Fisher effectively delivered millions of pages of Seq IDs and claims to ESTs and SNPs to the recycling bin). The Report ends with the hope that KSR and Kubin revived the “obvious to try” (to clone) standard so that existing patents on genes will be challenged.

While I was sure that the Commission was headed toward a recommendation that patents on isolated genes should be outlawed, after noting that such claims are allowable in one form or another worldwide, the Commission recommended enactment of statutory exemptions from liability for those infringing gene claims by developing and selling tests developed for patient care purposes (but wait, earlier the Commission recommended barring patenting such tests altogether), and enacting an exemption for liability for those using patented genes ‘in the pursuit of research” (I thought we already had this exemption under common law – the Commission also misses the legal point that a patented test can be evaluated to see if it works without infringement). The Report closes with a bit of a whimper, by re-endorsing the NIH Best Practices for the Licensing of Genomic Inventions and the “Nine Points to Consider in Licensing University Technology” endorsed by AUTM. Finally, the Report recommends that the PTO establish a scientific advisory committee on genetic testing. “The Committee believes experts in the field could help USPTO in its development of guidelines on determinations of nonobviousness and subject matter eligibility in this field once pending court decisions such a Bilski v. Kappos are decided.”

Oddly, my phone remains silent.

Hearings On SACGHS Report

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